All seed that is femmed by inducing sex reversal have the hermaphrodite trait so yes you would be breeding in that trait. This doesn't necessarily mean all subsequent generations will herm out with no external stress but they will be more prone to herm than seeds bred by regular seed. Hermies are usually caused by external stress especially light exposure during the dark period and femmed seed is more prone to this. Reg seed can herm out too if given the right stress conditions just less prone to do so.
I have crossed several strains in which the mothers were originally from femmed seed but since these are just for my own personal seed stock it doesn't matter that much. I don't breed for commercial sale so my reputation as a breeder is not on the line. If you just want to make some seeds go ahead. You will not be wasting your time. Mutants are caused when you in breed several generations of unstable strains. Just doing a few crosses for personal seed stock or using colloidal silver to force a couple plants to herm won't do it. I do think that it's a better option to breed the old fashioned way of pollenization than it is to force reversal. Then you can freeze the male pollen for selected seed making in the future without making a big mess.