i dont think it is burn from foilar spray because of were its at and your useing t5s,3 weeks from seed is a delicate time the leaf is very soft and hasnt really hardened yet,i would try and seperate as much as possible and keep a close eye on it,if they remain sick just keep the healthy,you only need 1 good mother for all the clones you want,if you have the space go ahead and repot,make sure the soil is almost dry before transplanting,but im not sure at 3 weeks they need transplanting,but only transplant the ones that have nice white roots circling the bottom of the cups,also i never really had to feed untill about the end of 3rd week,i use ro water because my town water is 900ppm on a good day,so i give it a little superthrive or is it thrivealive b1 and a little growzyme to bring my ro water too 200 ppm for first 3 weeks,then i use nutes depending on the need,some may not even need it at 3 but if they do i give a an equal dose of grow micro bloom for its first feeding at about 450 ppm then i use the old 3-2-1 ratio of grow micro bloom and some gauno during veg and i never go over 680 untill the feeding i put it into flower,but your not their yet,but a buddies going to look at your pics to see if he can identify the problem.