Firstly dude, one major thing is check can u use Neem 1 week before u intend to harvest?? I'm not into my pesticides thankfully but if u haven't checked already, do definitely find out if its safe to smoke spraying that close to harvest. (and like i say, apologies if u already checked & i'm being a paranoid loon!)
Otherwise, i can't give u much answer sadly as it does look strange from ur pics - there's alot of flushed dark green new foliage that looks fine but also alot of them look almost overly glossy & abit hairless too, which seems odd. With my limited experience of problems, my educated guess would be something its ingested or a diease/infection - it almost looks like parts of it are rotting & dying.
My only one tip would be, if u can, slide the pot quickly off the bottom of one would be good idea to see what roots look like or if any sign of moulds, slimes, insects, etc down there. Tho i must say, i'd be surprised if it is insect damage as seems unusual symptoms.
best of luck man