What are you covering your rockwool with? It also never occurred to me to pretreat it with 5.5 ph solution. I will from now on. I always made a 1/2 strength solution that i use for rooting in a neutral base of 7. I will put the soaked cubes with the clones in them off to the side of the HPS. In several days i rotate them into the mix. So far i have had no adverse effects. But i have seen some of my older cubes get green. How do i control that once it started?
Once it starts I'm not sure you get rid of it, but some h2o2 will keep in check and blocking light from it. I cover my pots with these light-proof sguares that are black on one side white on the other. Sorry can't think of name of them. Also, I've used scrap panda film and black painter's plastic. The algae feeds off the nute's and light, once you block the light it should start to die.
Right now i use the rocks in 6" baskets. I place the cubes in them and Bam. But i am open to any advice on how to tweak it better. How often do you water and for how long? Is it different from veg to bloom?
That's about the same size pot's I use. For bloom in the beginning I flood once a day, in the morning. When the pot's do feel as heavy towards the end of the day, I know the plants are feeding more that's when I flood them twice in a day. Seems to happen sometime in the last four weeks of flowering.
Can't say about veg, I keep my mother's in soil and I don't really veg my clones. I would guess you can water once a day then as the plants get more developed roots, water twice in a day.