I'm not sue about black mold, but you should cover the rockwool to prevent algae. Especially if you aren't top feeding them. Aluminum foil works I guess, but Panda Film is good stuff.
Amazon.com: HFS (R Black and White Panda Film 5.5 Mil Poly Film (10X25FT): Garden & Outdoor
www.amazon.com
I think I'm the only person on the forum to use coco cubes, but I really like them and they would work well with your setup.
Our Patent-pending products are designed to optimize your grow operations. A great option for growers looking for rockwool and switch to coco.The compressed blocks once hydrated fill the fabric pot and becomes a ready-to-use cube. We use premium coco grow media triple washed, EC below 0.5...
floridagardensupplies.com