I completely disagree. How can a martyr killing people in the name of his god still kill if there's no cause to become a martyr over? How can heretics be killed, or lashed, or beaten if there's no heresy? The only reason most of these religious killings happen is because of the religion, not the people under the religion.
Look at the stance on homosexuality with most Christians; good people in all other aspects of their lives, except they take the time to spew hate speech about the abominations of the gay/lesbian lifestyle. If Christianity hadn't burned the idea that homosexuals were bad into everyone's heads, there wouldn't be this stigma that they're bad. They'd just "be". If Islam didn't exist and Islamic terrorists didn't think they were going to get 72 virgins when they died, how many planes do you think would be flown into buildings?
I believe it's things like this that t.d. is talking about, bad things that can only come from theism. There's no such thing as bad things that can only come from atheism, because there's no rules to follow for atheism, it's a lack of rules that come with the lack of belief.
As an atheist I believe I can look more objectively at hard to judge moral situations and make the correct choices based on the good of all, not based on what my religion tells me I have to do to properly practice my faith.